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Matrix Science database search engine mascot41
Database Search Engine Mascot41, supplied by Matrix Science, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/database+search+engine/engine+mascot%E2%80%99%E2%80%99+search/pm41298887-207-9-13
Average 86 stars, based on 1 article reviews
database search engine mascot41 - by Bioz Stars, 2026-10
86/100 stars

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Related Articles

Tandem Mass Spectroscopy:

Article Title: Mapping the hippocampal spatial proteomic signature in male and female mice of an early Alzheimer’s disease model
Article Snippet: .. The resulting MS/MS spectra were submitted to a MASCOT (Matrix Science, USA) database search engine using BioTools software (Bruker Daltonics, Germany) to match tryptic peptide sequences to their respective intact proteins. ..

Article Title: Interrogatory cell-based assays and uses thereof
Article Snippet: BG Medicine uses an off-line LC-MALDI MS/MS platform that results in better concordance of observed protein sets across the primary samples without the need of injecting the same sample multiple times. .. The main data processing steps within the BGM Proteomics workflow are: Peptide identification using the Mascot (Matrix Sciences) database search engine Automated in house validation of Mascot IDs Quantification of peptides and preliminary quantification of proteins Expert curation of final dataset Final assignment of peptides from each mix into a common set of proteins using the automated PVT tool Outlier elimination and final quantification of proteins (i) Data Processing of Individual iTRAQ Mixes As each iTRAQ mix is processed through the workflow the MS/MS spectra are analyzed using proprietary BGM software tools for peptide and protein identifications, as well as initial assessment of quantification information. ..

Article Title: Mapping the spatial proteomic signature of dorsal and ventral hippocampus in a mouse model of early Alzheimer’s disease: changes in synaptic plasticity-related proteins associated with sexual dimorphism
Article Snippet: .. The generated MS/MS spectra were submitted to a MASCOT (Matrix Science, USA) database search engine using BioTools software (Bruker Daltonics, Germany) to match tryptic peptide sequences to their respective intact proteins. ..

Biomarker Discovery:

Article Title: Interrogatory cell-based assays and uses thereof
Article Snippet: BG Medicine uses an off-line LC-MALDI MS/MS platform that results in better concordance of observed protein sets across the primary samples without the need of injecting the same sample multiple times. .. The main data processing steps within the BGM Proteomics workflow are: Peptide identification using the Mascot (Matrix Sciences) database search engine Automated in house validation of Mascot IDs Quantification of peptides and preliminary quantification of proteins Expert curation of final dataset Final assignment of peptides from each mix into a common set of proteins using the automated PVT tool Outlier elimination and final quantification of proteins (i) Data Processing of Individual iTRAQ Mixes As each iTRAQ mix is processed through the workflow the MS/MS spectra are analyzed using proprietary BGM software tools for peptide and protein identifications, as well as initial assessment of quantification information. ..

Multiplex sample analysis:

Article Title: Interrogatory cell-based assays and uses thereof
Article Snippet: BG Medicine uses an off-line LC-MALDI MS/MS platform that results in better concordance of observed protein sets across the primary samples without the need of injecting the same sample multiple times. .. The main data processing steps within the BGM Proteomics workflow are: Peptide identification using the Mascot (Matrix Sciences) database search engine Automated in house validation of Mascot IDs Quantification of peptides and preliminary quantification of proteins Expert curation of final dataset Final assignment of peptides from each mix into a common set of proteins using the automated PVT tool Outlier elimination and final quantification of proteins (i) Data Processing of Individual iTRAQ Mixes As each iTRAQ mix is processed through the workflow the MS/MS spectra are analyzed using proprietary BGM software tools for peptide and protein identifications, as well as initial assessment of quantification information. ..

Software:

Article Title: Interrogatory cell-based assays and uses thereof
Article Snippet: BG Medicine uses an off-line LC-MALDI MS/MS platform that results in better concordance of observed protein sets across the primary samples without the need of injecting the same sample multiple times. .. The main data processing steps within the BGM Proteomics workflow are: Peptide identification using the Mascot (Matrix Sciences) database search engine Automated in house validation of Mascot IDs Quantification of peptides and preliminary quantification of proteins Expert curation of final dataset Final assignment of peptides from each mix into a common set of proteins using the automated PVT tool Outlier elimination and final quantification of proteins (i) Data Processing of Individual iTRAQ Mixes As each iTRAQ mix is processed through the workflow the MS/MS spectra are analyzed using proprietary BGM software tools for peptide and protein identifications, as well as initial assessment of quantification information. ..

Generated:

Article Title: Mapping the spatial proteomic signature of dorsal and ventral hippocampus in a mouse model of early Alzheimer’s disease: changes in synaptic plasticity-related proteins associated with sexual dimorphism
Article Snippet: .. The generated MS/MS spectra were submitted to a MASCOT (Matrix Science, USA) database search engine using BioTools software (Bruker Daltonics, Germany) to match tryptic peptide sequences to their respective intact proteins. ..



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